EnhancerDB
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  3. rs559677453[chr1:223908176]
Enhancers that have rs559677453[chr1:223908176]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 223886085 223931782 enh12712
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs559677453[chr1:223908176]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 223908170 223908178 TBX5 JASPAR yes 35672267
chr1 223908170 223908179 ZEB1 JASPAR yes 35672268
chr1 223908170 223908183 ZBTB18 JASPAR yes 35672269
chr1 223908171 223908181 ID4 JASPAR yes 35672270
chr1 223908171 223908181 TCF3 JASPAR yes 35672271
chr1 223908171 223908181 TCF4 JASPAR yes 35672272
chr1 223908173 223908178 USF2 TRANSFAC yes 35672273
Genes associated with rs559677453[chr1:223908176], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More