EnhancerDB
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  3. rs559682601[chr2:26278257]
Enhancers that have rs559682601[chr2:26278257]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 26273785 26313195 enh5372
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Epithelial (MCF-7) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs559682601[chr2:26278257]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 26278245 26278264 PAX5 JASPAR yes 72519538
chr2 26278254 26278275 IRF1 JASPAR yes 72519539
chr2 26278255 26278276 IRF1 JASPAR yes 72519540
Genes associated with rs559682601[chr2:26278257], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More