EnhancerDB
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  3. rs559698562[chr1:94787308]
Enhancers that have rs559698562[chr1:94787308]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 94779785 94813175 enh12071
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs559698562[chr1:94787308]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 94787155 94787625 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 107815544
chr1 94787164 94787701 TCF12 UCSC Txn Factor no Conserved 107815545
chr1 94787164 94787701 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107815546
chr1 94787187 94787691 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107815547
chr1 94787302 94787317 TFAP2A JASPAR yes 30872735
chr1 94787305 94787317 TFAP2A JASPAR yes 30872736
chr1 94787305 94787317 TFAP2B JASPAR yes 30872737
chr1 94787305 94787317 TFAP2C JASPAR yes 30872738
chr1 94787305 94787320 TFAP2A JASPAR yes 30872739
Genes associated with rs559698562[chr1:94787308], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More