EnhancerDB
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  3. rs55972928[chr16:85790478]
Enhancers that have rs55972928[chr16:85790478]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85790438 85804195 enh31985
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Astrocyte Blood (OCI-LY7) Lung (A549) Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Neural Stem Cells (H9) Stomach
Transcript factors that have rs55972928[chr16:85790478]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85789767 85790538 POLR2A UCSC Txn Factor no Conserved 108217156
chr16 85789886 85790482 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108217159
chr16 85790296 85790572 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108217169
chr16 85790475 85790490 FOXP1 JASPAR yes 12095445
chr16 85790477 85790483 TBP TRANSFAC yes 12095446
Genes associated with rs55972928[chr16:85790478], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More