EnhancerDB
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  3. rs559758155[chr12:52538179]
Enhancers that have rs559758155[chr12:52538179]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52531174 52553795 enh2357
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs559758155[chr12:52538179]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52538139 52539820 ZBTB33 GTRD no Lung (A549) 108033090
chr12 52538170 52538186 GLIS1 JASPAR yes 120921431
chr12 52538170 52539881 ZBTB33 GTRD no Lung (A549) 108033091
chr12 52538171 52538185 GLIS2 JASPAR yes 120921432
chr12 52538173 52538188 RUNX2 JASPAR yes 120921433
chr12 52538179 52538185 SOX10 JASPAR yes 120921434
Genes associated with rs559758155[chr12:52538179], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More