EnhancerDB
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  3. rs559774119[chr3:8541709]
Enhancers that have rs559774119[chr3:8541709]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 8538945 8574055 enh35162
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Stomach Brain (SK-N-SH) Ovary Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Lung Muscle (A673) Heart
Transcript factors that have rs559774119[chr3:8541709]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 8541689 8541710 IRF1 JASPAR yes 297101
chr3 8541690 8541711 IRF1 JASPAR yes 297103
chr3 8541691 8541712 IRF1 JASPAR yes 297105
chr3 8541692 8541713 IRF1 JASPAR yes 297107
chr3 8541693 8541714 IRF1 JASPAR yes 297109
chr3 8541694 8541709 FOXP1 JASPAR yes 297110
chr3 8541694 8541715 IRF1 JASPAR yes 297111
chr3 8541695 8541710 FOXP1 JASPAR yes 297112
chr3 8541695 8541716 IRF1 JASPAR yes 297113
chr3 8541696 8541711 FOXP1 JASPAR yes 297114
chr3 8541696 8541717 IRF1 JASPAR yes 297115
chr3 8541697 8541712 FOXP1 JASPAR yes 297116
chr3 8541697 8541718 IRF1 JASPAR yes 297117
chr3 8541698 8541713 FOXP1 JASPAR yes 297118
chr3 8541700 8541715 FOXP1 JASPAR yes 297119
chr3 8541701 8541722 IRF1 JASPAR yes 297120
chr3 8541702 8541717 FOXP1 JASPAR yes 297121
chr3 8541702 8541723 IRF1 JASPAR yes 297122
chr3 8541706 8541721 STAT2 JASPAR yes 297123
chr3 8541709 8541730 IRF1 JASPAR yes 297124
Genes associated with rs559774119[chr3:8541709], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More