EnhancerDB
  1. Home
  2. SNP
  3. rs559779568[chr12:125168183]
Enhancers that have rs559779568[chr12:125168183]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125156845 125176489 enh15094
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs559779568[chr12:125168183]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125167677 125168230 ZNF274 GTRD no Bone Marrow (K562) 21581692
chr12 125167694 125168198 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21581695
chr12 125167732 125168208 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21581697
chr12 125167858 125168454 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21581703
chr12 125167894 125168398 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21581705
chr12 125168016 125168260 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21581706
chr12 125168180 125168193 TFAP2A JASPAR yes 124408313
chr12 125168180 125168193 TFAP2B JASPAR yes 124408314
chr12 125168180 125168193 TFAP2C JASPAR yes 124408315
chr12 125168180 125168195 TFAP2A JASPAR yes 124408316
chr12 125168180 125168195 TFAP2C JASPAR yes 124408317
chr12 125168183 125168203 RREB1 JASPAR yes 124408318
Genes associated with rs559779568[chr12:125168183], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More