EnhancerDB
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  3. rs559780562[chr15:41080750]
Enhancers that have rs559780562[chr15:41080750]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 41072825 41093715 enh16067
Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs559780562[chr15:41080750]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 41080740 41080759 PAX5 JASPAR yes 22953995
chr15 41080747 41080756 HIC2 JASPAR yes 22953996
chr15 41080750 41080754 LFA1 TRANSFAC yes 22953997
Genes associated with rs559780562[chr15:41080750], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More