EnhancerDB
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  3. rs559787040[chr10:33400996]
Enhancers that have rs559787040[chr10:33400996]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 33393842 33437095 enh1172
Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs559787040[chr10:33400996]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 33400990 33401011 IRF1 JASPAR yes 126571653
chr10 33400992 33401007 PRDM1 JASPAR yes 126571654
chr10 33400995 33401010 FOXA1 JASPAR yes 126571655
chr10 33400996 33401008 FOXI1 JASPAR yes 126571656
chr10 33400996 33401010 POU4F1 JASPAR yes 126571657
chr10 33400996 33401011 FOXP1 JASPAR yes 126571658
chr10 33400996 33401011 HNF1A JASPAR yes 126571659
Genes associated with rs559787040[chr10:33400996], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More