EnhancerDB
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  3. rs55979620[chr16:68785396]
Enhancers that have rs55979620[chr16:68785396]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 68769718 68797188 enh16743
Astrocyte Colon (HCT116) Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs55979620[chr16:68785396]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 68785392 68785408 POU4F2 JASPAR yes 11222145
chr16 68785392 68785408 POU4F3 JASPAR yes 11222146
chr16 68785393 68785408 FOXA1 JASPAR yes 11222147
chr16 68785394 68785406 FOXI1 JASPAR yes 11222148
chr16 68785394 68785408 POU4F1 JASPAR yes 11222149
chr16 68785394 68785409 HNF1A JASPAR yes 11222150
chr16 68785395 68785407 FOXC2 JASPAR yes 11222151
chr16 68785395 68785409 ONECUT3 JASPAR yes 11222152
chr16 68785396 68785407 FOXB1 JASPAR yes 11222153
chr16 68785396 68785407 FOXC1 JASPAR yes 11222154
chr16 68785396 68785407 PROP1 JASPAR yes 11222155
chr16 68785396 68785412 POU4F2 JASPAR yes 11222156
chr16 68785396 68785412 POU4F3 JASPAR yes 11222157
Genes associated with rs55979620[chr16:68785396], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More