EnhancerDB
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  3. rs559801826[chr6:35569451]
Enhancers that have rs559801826[chr6:35569451]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 35560685 35576643 enh9078
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Peripheral Blood (MM.1S) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr6 35569141 35569999 vista51718
VISTA
Transcript factors that have rs559801826[chr6:35569451]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 35569333 35569752 STAT1 UCSC Txn Factor no Conserved 108539860
chr6 35569441 35569452 PHOX2A JASPAR yes 70353017
chr6 35569441 35569452 PROP1 JASPAR yes 70353018
chr6 35569441 35569452 PHOX2A JASPAR yes 101294045
chr6 35569441 35569452 PROP1 JASPAR yes 101294046
chr6 35569445 35569456 FOXB1 JASPAR yes 70353019
chr6 35569445 35569456 FOXC1 JASPAR yes 70353020
chr6 35569445 35569456 FOXB1 JASPAR yes 101294047
chr6 35569445 35569456 FOXC1 JASPAR yes 101294048
chr6 35569445 35569461 POU4F3 JASPAR yes 70353021
chr6 35569445 35569461 POU4F3 JASPAR yes 101294049
chr6 35569447 35569462 HNF1A JASPAR yes 70353022
chr6 35569447 35569462 HNF1A JASPAR yes 101294050
chr6 35569448 35569461 HNF1B JASPAR yes 70353023
chr6 35569448 35569461 HNF1B JASPAR yes 101294051
chr6 35569448 35569462 POU4F1 JASPAR yes 70353024
chr6 35569448 35569462 POU4F1 JASPAR yes 101294052
chr6 35569448 35569464 POU4F2 JASPAR yes 70353025
chr6 35569448 35569464 POU4F3 JASPAR yes 70353026
chr6 35569448 35569464 POU4F2 JASPAR yes 101294053
chr6 35569448 35569464 POU4F3 JASPAR yes 101294054
chr6 35569449 35569461 HNF1B JASPAR yes 70353027
chr6 35569449 35569461 HNF1B JASPAR yes 101294055
Genes associated with rs559801826[chr6:35569451], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More