EnhancerDB
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  3. rs559806047[chr17:25844343]
Enhancers that have rs559806047[chr17:25844343]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 25838865 25883455 enh17064
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs559806047[chr17:25844343]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 25844334 25844355 IRF1 JASPAR yes 53639851
chr17 25844336 25844351 PRDM1 JASPAR yes 53639852
chr17 25844340 25844361 IRF1 JASPAR yes 53639853
chr17 25844341 25844356 FOXP1 JASPAR yes 53639854
chr17 25844341 25844362 IRF1 JASPAR yes 53639855
chr17 25844343 25844358 FOXP1 JASPAR yes 53639856
Genes associated with rs559806047[chr17:25844343], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More