EnhancerDB
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  3. rs559851878[chr1:17900130]
Enhancers that have rs559851878[chr1:17900130]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 17883825 17906655 enh11558
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs559851878[chr1:17900130]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 17900121 17900133 INSM1 JASPAR yes 27103577
chr1 17900126 17900131 SP1 TRANSFAC yes 27103578
chr1 17900126 17900137 NFKB1 JASPAR yes 27103579
chr1 17900130 17900135 SP1 TRANSFAC yes 27103580
chr1 17900130 17900136 SP1 TRANSFAC yes 27103581
chr1 17900130 17900137 SP1 TRANSFAC yes 27103582
Genes associated with rs559851878[chr1:17900130], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More