EnhancerDB
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  3. rs559899068[chr16:4262102]
Enhancers that have rs559899068[chr16:4262102]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 4260205 4271990 enh16513
Skin (Keratinocyte) Cervix (HeLa-S3) Kidney Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Lung Lung (A549) Stomach Placenta Colon (HCT116) Thyroid Muscle (Myoblast) Breast Uterus Heart
Transcript factors that have rs559899068[chr16:4262102]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 4261250 4262955 ZNF143 GTRD no Epithelial (MCF-7) 108175737
chr16 4261270 4262793 ZBTB33 GTRD no Lung (A549) 21686224
chr16 4261270 4262793 ZBTB33 GTRD no Lung (A549) 108175738
chr16 4261270 4263024 ZNF143 GTRD no Epithelial (MCF-7) 108175739
chr16 4261329 4262550 ZNF143 GTRD no Epithelial (MCF-7) 108175740
chr16 4261335 4262888 ZNF143 GTRD no Epithelial (MCF-7) 108175741
chr16 4261392 4262983 ZNF143 GTRD no Epithelial (MCF-7) 108175742
chr16 4261400 4262731 ZNF274 GTRD no Bone Marrow (K562) 108175743
chr16 4261475 4262912 TCF7L2 GTRD no Colon (HCT116) 21686225
chr16 4261475 4262912 TCF7L2 GTRD no Colon (HCT116) 108175744
chr16 4261492 4263043 TCF7L2 GTRD no Colon (HCT116) 21686226
chr16 4261492 4263043 TCF7L2 GTRD no Colon (HCT116) 108175745
chr16 4262093 4262928 ZNF143 GTRD no Epithelial (MCF-7) 108175746
chr16 4262101 4262110 TFAP2A JASPAR yes 9262690
Genes associated with rs559899068[chr16:4262102], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More