EnhancerDB
  1. Home
  2. SNP
  3. rs559904235[chr12:122229753]
Enhancers that have rs559904235[chr12:122229753]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 122219767 122240055 enh2650
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Lung Heart
chr12 122229588 122230472 vista15194
VISTA
Transcript factors that have rs559904235[chr12:122229753]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 122229445 122231065 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21579500
chr12 122229445 122231065 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108065673
chr12 122229445 122242257 POLR2A UCSC Txn Factor no Conserved 108065674
chr12 122229553 122229909 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21579501
chr12 122229553 122229909 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108065675
chr12 122229605 122229935 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21579502
chr12 122229605 122229935 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108065676
chr12 122229621 122230097 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21579503
chr12 122229621 122230097 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108065677
chr12 122229635 122229899 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21579504
chr12 122229635 122229899 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108065678
chr12 122229645 122230021 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21579505
chr12 122229645 122230021 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108065679
chr12 122229648 122229984 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21579506
chr12 122229648 122229984 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108065680
chr12 122229672 122229956 ESR1 UCSC Txn Factor no Conserved 108065681
chr12 122229674 122230178 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21579507
chr12 122229674 122230178 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108065682
chr12 122229703 122229901 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21579508
chr12 122229703 122229901 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108065683
chr12 122229714 122229990 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21579509
chr12 122229714 122229990 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108065684
chr12 122229749 122229759 NKX2-3 JASPAR yes 82491072
chr12 122229749 122229759 NKX2-3 JASPAR yes 124247106
chr12 122229750 122229759 NKX2-8 JASPAR yes 82491073
chr12 122229750 122229759 NKX2-8 JASPAR yes 124247107
Genes associated with rs559904235[chr12:122229753], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More