EnhancerDB
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  3. rs559929420[chr3:186675840]
Enhancers that have rs559929420[chr3:186675840]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 186665345 186714055 enh7749
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Lung (PC-9) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs559929420[chr3:186675840]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 186675834 186675855 IRF1 JASPAR yes 8363691
chr3 186675836 186675851 FOXP1 JASPAR yes 8363692
chr3 186675837 186675852 FOXP1 JASPAR yes 8363693
chr3 186675838 186675844 TBP TRANSFAC yes 8363694
chr3 186675838 186675853 FOXP1 JASPAR yes 8363695
chr3 186675838 186675859 IRF1 JASPAR yes 8363696
chr3 186675839 186675854 FOXP1 JASPAR yes 8363697
Genes associated with rs559929420[chr3:186675840], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More