EnhancerDB
  1. Home
  2. SNP
  3. rs559961172[chr2:26304636]
Enhancers that have rs559961172[chr2:26304636]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 26273785 26313195 enh5372
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Epithelial (MCF-7) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs559961172[chr2:26304636]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 26304623 26304637 SPI1 JASPAR yes 72523629
chr2 26304628 26304638 TEAD4 JASPAR yes 72523631
chr2 26304636 26304642 TBP TRANSFAC yes 72523632
Genes associated with rs559961172[chr2:26304636], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More