EnhancerDB
  1. Home
  2. SNP
  3. rs55996607[chr1:2172838]
Enhancers that have rs55996607[chr1:2172838]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 2162230 2193653 enh11423
Bone Marrow (K562) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs55996607[chr1:2172838]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 2172829 2172850 IRF1 JASPAR yes 26225727
chr1 2172835 2172850 FOXP1 JASPAR yes 26225728
chr1 2172836 2172851 FOXP1 JASPAR yes 26225729
Genes associated with rs55996607[chr1:2172838], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More