EnhancerDB
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  3. rs55999185[chr1:41409640]
Enhancers that have rs55999185[chr1:41409640]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 41400705 41424275 enh11780
Bone Marrow (K562) Skin (Keratinocyte) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Liver Bone (Osteoblast) Placenta Pancreas (Panc1) Lung (PC-9) Pancreas Spleen Uterus Stomach
Transcript factors that have rs55999185[chr1:41409640]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 41409635 41409656 IRF1 JASPAR yes 28357657
chr1 41409636 41409642 TCF4 TRANSFAC yes 28357658
chr1 41409636 41409651 FOXP1 JASPAR yes 28357659
chr1 41409637 41409648 FOXP2 JASPAR yes 28357660
chr1 41409637 41409649 FOXC2 JASPAR yes 28357661
chr1 41409637 41409652 STAT2 JASPAR yes 28357662
chr1 41409638 41409653 FOXP1 JASPAR yes 28357663
Genes associated with rs55999185[chr1:41409640], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More