EnhancerDB
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  3. rs55999889[chr18:56450510]
Enhancers that have rs55999889[chr18:56450510]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 56442885 56463415 enh17747
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-MC) Prostate (RWPE1) Ovary Esophagus Astrocyte Stomach Muscle (A673) Placenta Pancreas (Panc1) Lung (PC-9) Breast Spleen Uterus Heart
Transcript factors that have rs55999889[chr18:56450510]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 56450507 56450522 FOXP1 JASPAR yes 110976144
chr18 56450508 56450523 FOXP1 JASPAR yes 110976145
chr18 56450509 56450524 FOXP1 JASPAR yes 110976146
chr18 56450509 56450530 IRF1 JASPAR yes 110976147
chr18 56450510 56450525 FOXP1 JASPAR yes 110976148
chr18 56450510 56450531 IRF1 JASPAR yes 110976149
Genes associated with rs55999889[chr18:56450510], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More