EnhancerDB
  1. Home
  2. SNP
  3. rs559999512[chr17:62999257]
Enhancers that have rs559999512[chr17:62999257]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 62953485 63000035 enh4531
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs559999512[chr17:62999257]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 62998989 62999447 ZNF274 GTRD no Bone Marrow (K562) 21780993
chr17 62999250 62999271 IRF1 JASPAR yes 55337998
chr17 62999251 62999265 SPI1 JASPAR yes 55337999
chr17 62999253 62999274 IRF1 JASPAR yes 55338000
chr17 62999257 62999272 FOXP1 JASPAR yes 55338001
chr17 62999257 62999278 IRF1 JASPAR yes 55338002
Genes associated with rs559999512[chr17:62999257], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More