EnhancerDB
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  3. rs560017887[chr4:7965043]
Enhancers that have rs560017887[chr4:7965043]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr4 7955942 7984080 enh21353
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs560017887[chr4:7965043]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr4 7965037 7965049 HES5 JASPAR yes 88148243
chr4 7965037 7965049 HES7 JASPAR yes 88148244
chr4 7965037 7965049 PKNOX1 JASPAR yes 88148245
chr4 7965037 7965049 PKNOX2 JASPAR yes 88148246
chr4 7965037 7965049 TGIF1 JASPAR yes 88148247
chr4 7965037 7965049 TGIF2 JASPAR yes 88148248
chr4 7965038 7965048 CLOCK JASPAR yes 88148249
chr4 7965038 7965048 NEUROG2 JASPAR yes 88148250
chr4 7965042 7965054 IRF1 JASPAR yes 88148251
Genes associated with rs560017887[chr4:7965043], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More