EnhancerDB
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  3. rs560037525[chr17:27974149]
Enhancers that have rs560037525[chr17:27974149]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 27963570 27975125 enh4328
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs560037525[chr17:27974149]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 27972652 27975778 ZNF274 GTRD no Bone Marrow (K562) 21749239
chr17 27972652 27975778 ZNF274 GTRD no Bone Marrow (K562) 108247406
chr17 27974145 27974150 SP1 TRANSFAC yes 53745510
chr17 27974145 27974154 HIC2 JASPAR yes 53745511
chr17 27974148 27974152 LFA1 TRANSFAC yes 53745512
chr17 27974149 27974159 ID4 JASPAR yes 53745513
chr17 27974149 27974159 TCF3 JASPAR yes 53745514
chr17 27974149 27974159 TCF4 JASPAR yes 53745515
Genes associated with rs560037525[chr17:27974149], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More