EnhancerDB
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  3. rs560111406[chr1:95259489]
Enhancers that have rs560111406[chr1:95259489]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 95254882 95276775 enh12082
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs560111406[chr1:95259489]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 95259481 95259494 TFAP2A JASPAR yes 30916927
chr1 95259481 95259494 TFAP2B JASPAR yes 30916928
chr1 95259481 95259494 TFAP2C JASPAR yes 30916929
Genes associated with rs560111406[chr1:95259489], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More