EnhancerDB
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  3. rs56012134[chr1:203481570]
Enhancers that have rs56012134[chr1:203481570]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 203471885 203497995 enh12556
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs56012134[chr1:203481570]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 203479781 203481906 ZNF143 GTRD no Epithelial (MCF-7) 21369011
chr1 203479893 203481935 ZNF143 GTRD no Epithelial (MCF-7) 21369012
chr1 203479998 203481659 ZNF274 GTRD no Cervix (HeLa-S3) 21369016
chr1 203480026 203481815 ZNF143 GTRD no Epithelial (MCF-7) 21369018
chr1 203480077 203481590 ZNF274 GTRD no Cervix (HeLa-S3) 21369019
chr1 203480093 203481879 ZNF274 GTRD no Cervix (HeLa-S3) 21369020
chr1 203480499 203481618 ZNF143 GTRD no Epithelial (MCF-7) 21369055
chr1 203481559 203481572 DUXA JASPAR yes 34633811
chr1 203481560 203481571 BATF JASPAR yes 34633812
chr1 203481560 203481571 DUX4 JASPAR yes 34633813
Genes associated with rs56012134[chr1:203481570], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More