EnhancerDB
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  3. rs560135871[chr1:234794491]
Enhancers that have rs560135871[chr1:234794491]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234788925 234800115 enh12793
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs560135871[chr1:234794491]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 234794488 234794503 HNF4A JASPAR yes 36299746
chr1 234794489 234794503 RXRB JASPAR yes 36299747
chr1 234794489 234794503 RXRG JASPAR yes 36299748
chr1 234794489 234794504 HNF4G JASPAR yes 36299749
chr1 234794489 234794504 NR2C2 JASPAR yes 36299750
Genes associated with rs560135871[chr1:234794491], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More