EnhancerDB
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  3. rs560139049[chr12:110995431]
Enhancers that have rs560139049[chr12:110995431]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 110991201 111006555 enh2592
Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs560139049[chr12:110995431]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 110995423 110995434 CDX2 JASPAR yes 123701251
chr12 110995424 110995435 HOXA10 JASPAR yes 123701252
chr12 110995425 110995434 CDX1 JASPAR yes 123701253
chr12 110995425 110995435 HOXA13 JASPAR yes 123701254
chr12 110995425 110995435 HOXB13 JASPAR yes 123701255
chr12 110995425 110995435 HOXD13 JASPAR yes 123701256
Genes associated with rs560139049[chr12:110995431], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More