EnhancerDB
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  3. rs560154690[chr2:28945811]
Enhancers that have rs560154690[chr2:28945811]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 28928585 28946675 enh18396
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Kidney Epithelial (MCF-7) Skin (Keratinocyte) Stomach Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs560154690[chr2:28945811]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 28945805 28945815 SP1 JASPAR yes 72674047
chr2 28945805 28945826 ZNF263 JASPAR yes 72674048
chr2 28945807 28945812 SP1 TRANSFAC yes 72674049
chr2 28945807 28945819 HINFP JASPAR yes 72674050
Genes associated with rs560154690[chr2:28945811], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More