EnhancerDB
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  3. rs560197214[chr1:2211171]
Enhancers that have rs560197214[chr1:2211171]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 2194994 2213473 enh11424
Brain (SK-N-MC) Liver Astrocyte Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Large Intestine Esophagus Placenta Muscle (Myoblast) Muscle (Myotube) Lung Muscle (A673) Heart
Transcript factors that have rs560197214[chr1:2211171]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 2211150 2211171 IRF1 JASPAR yes 26231080
chr1 2211162 2211172 HOXA13 JASPAR yes 26231083
chr1 2211162 2211172 HOXB13 JASPAR yes 26231084
chr1 2211162 2211172 HOXD13 JASPAR yes 26231085
chr1 2211162 2211173 HOXA10 JASPAR yes 26231086
chr1 2211163 2211172 CDX1 JASPAR yes 26231087
chr1 2211163 2211174 CDX2 JASPAR yes 26231088
Genes associated with rs560197214[chr1:2211171], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More