EnhancerDB
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  3. rs560202080[chr1:210047205]
Enhancers that have rs560202080[chr1:210047205]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 210041545 210078655 enh27453
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Astrocyte Bone (Osteoblast) Muscle (A673) Thyroid Uterus Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9)
Transcript factors that have rs560202080[chr1:210047205]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 210047200 210047214 RORA JASPAR yes 34999056
chr1 210047201 210047206 ATF1 TRANSFAC yes 34999057
chr1 210047205 210047212 NKX3-1 JASPAR yes 34999058
Genes associated with rs560202080[chr1:210047205], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More