EnhancerDB
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Enhancers that have rs560219404[chr1:234997057]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234990369 235041235 enh12797
Bone Marrow (K562) Liver Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs560219404[chr1:234997057]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 234996665 235000096 ZNF274 GTRD no Cervix (HeLa-S3) 21398973
chr1 234996726 234999316 ZNF143 GTRD no Epithelial (MCF-7) 21398974
chr1 234996739 234998953 ZNF274 GTRD no Liver (HepG2) 21398975
chr1 234996806 234999473 ZNF274 GTRD no Cervix (HeLa-S3) 21398976
chr1 234996824 234998055 ZNF143 GTRD no Epithelial (MCF-7) 21398977
chr1 234996833 234998905 ZNF274 GTRD no Cervix (HeLa-S3) 21398978
chr1 234996836 234997824 ZNF143 GTRD no Epithelial (MCF-7) 21398979
chr1 234996851 234997933 ZNF274 GTRD no Bone Marrow (K562) 21398980
chr1 234996877 234999087 ZNF274 GTRD no Liver (HepG2) 21398981
chr1 234996897 234998627 AR GTRD no Prostate (PC-3) 21398982
chr1 234996904 234999053 P63 GTRD no Skin (Keratinocyte) 21398983
chr1 234996919 234997914 ZNF274 GTRD no Cervix (HeLa-S3) 21398984
chr1 234996932 234998923 ZNF274 GTRD no Cervix (HeLa-S3) 21398985
chr1 234996935 234998973 P63 GTRD no Skin (Keratinocyte) 21398986
chr1 234996941 234997943 ZNF143 GTRD no Epithelial (MCF-7) 21398987
chr1 234996941 234998081 ZNF143 GTRD no Epithelial (MCF-7) 21398988
chr1 234996945 234997882 ZNF274 GTRD no Cervix (HeLa-S3) 21398989
chr1 234996947 234998896 ZNF274 GTRD no Liver (HepG2) 21398990
chr1 234996965 234997887 ZNF143 GTRD no Epithelial (MCF-7) 21398991
chr1 234996967 234997916 ZNF143 GTRD no Epithelial (MCF-7) 21398992
chr1 234996968 234998089 ZNF143 GTRD no Epithelial (MCF-7) 21398993
chr1 234996970 234998929 ZNF274 GTRD no Cervix (HeLa-S3) 21398994
chr1 234996976 234997972 ZNF143 GTRD no Epithelial (MCF-7) 21398995
chr1 234996981 234998019 ZNF274 GTRD no Bone Marrow (K562) 21398996
chr1 234996981 234998051 ZNF143 GTRD no Epithelial (MCF-7) 21398997
chr1 234996981 234998888 P63 GTRD no Skin (Keratinocyte) 21398998
chr1 234996990 234999051 ZNF274 GTRD no Cervix (HeLa-S3) 21398999
chr1 234996997 234997934 ZNF143 GTRD no Epithelial (MCF-7) 21399000
chr1 234997003 234998891 P63 GTRD no Skin (Keratinocyte) 21399001
chr1 234997007 234998883 ZNF274 GTRD no Cervix (HeLa-S3) 21399002
chr1 234997008 234997734 ZNF274 GTRD no Cervix (HeLa-S3) 21399003
chr1 234997010 234997912 ZNF143 GTRD no Epithelial (MCF-7) 21399004
chr1 234997011 234997856 ZNF274 GTRD no Bone Marrow (K562) 21399005
chr1 234997020 234998909 ZNF274 GTRD no Liver (HepG2) 21399006
chr1 234997021 234997656 ZNF143 GTRD no Epithelial (MCF-7) 21399007
chr1 234997021 234997774 ZNF143 GTRD no Epithelial (MCF-7) 21399008
chr1 234997022 234997899 ZNF143 GTRD no Epithelial (MCF-7) 21399009
chr1 234997026 234997784 ZNF274 GTRD no Bone Marrow (K562) 21399010
chr1 234997028 234999077 ZNF274 GTRD no Liver (HepG2) 21399011
chr1 234997031 234997783 ZNF143 GTRD no Epithelial (MCF-7) 21399012
chr1 234997036 234998867 ZNF274 GTRD no Cervix (HeLa-S3) 21399013
chr1 234997037 234997863 ZNF143 GTRD no Epithelial (MCF-7) 21399014
chr1 234997039 234998871 ZNF274 GTRD no Cervix (HeLa-S3) 21399015
chr1 234997044 234998863 ZNF274 GTRD no Liver (HepG2) 21399016
chr1 234997048 234997661 ZNF274 GTRD no Bone Marrow (K562) 21399017
chr1 234997049 234997846 ZNF143 GTRD no Epithelial (MCF-7) 21399018
chr1 234997053 234997751 ZNF143 GTRD no Epithelial (MCF-7) 21399019
chr1 234997057 234997844 ZNF143 GTRD no Epithelial (MCF-7) 21399020
Genes associated with rs560219404[chr1:234997057], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More