EnhancerDB
  1. Home
  2. SNP
  3. rs560224649[chr17:62989007]
Enhancers that have rs560224649[chr17:62989007]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 62953485 63000035 enh4531
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs560224649[chr17:62989007]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 62985563 62989044 ZNF143 GTRD no Epithelial (MCF-7) 21780807
chr17 62985563 62989044 ZNF143 GTRD no Epithelial (MCF-7) 108283232
chr17 62988360 62989020 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21780865
chr17 62988719 62989029 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21780897
chr17 62989001 62989016 FOXP1 JASPAR yes 55336562
chr17 62989002 62989015 POU2F2 JASPAR yes 55336563
chr17 62989007 62989013 TBP TRANSFAC yes 55336564
Genes associated with rs560224649[chr17:62989007], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More