EnhancerDB
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  3. rs560225971[chr15:99981013]
Enhancers that have rs560225971[chr15:99981013]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 99971645 99998102 enh16467
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs560225971[chr15:99981013]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 99980385 99981693 ZNF143 GTRD no Epithelial (MCF-7) 21682033
chr15 99980487 99982613 ZNF143 GTRD no Epithelial (MCF-7) 21682034
chr15 99980715 99981746 ZNF143 GTRD no Epithelial (MCF-7) 21682035
chr15 99980759 99981164 ZNF143 GTRD no Epithelial (MCF-7) 21682036
chr15 99980767 99981675 ZNF143 GTRD no Epithelial (MCF-7) 21682037
chr15 99980824 99981872 ZNF274 GTRD no Cervix (HeLa-S3) 21682038
chr15 99980936 99981759 ZNF274 GTRD no Bone Marrow (K562) 21682039
chr15 99980952 99981732 ZNF274 GTRD no Bone Marrow (K562) 21682040
chr15 99981006 99981017 TFAP2A JASPAR yes 25873762
chr15 99981006 99981017 TFAP2B JASPAR yes 25873763
chr15 99981006 99981017 TFAP2C JASPAR yes 25873764
chr15 99981008 99981830 ZNF143 GTRD no Epithelial (MCF-7) 21682041
Genes associated with rs560225971[chr15:99981013], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More