EnhancerDB
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  3. rs560259020[chr17:63013236]
Enhancers that have rs560259020[chr17:63013236]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 63011625 63027955 enh4532
Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs560259020[chr17:63013236]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 63013227 63013237 HOXC10 JASPAR yes 55339146
chr17 63013227 63013237 HOXD11 JASPAR yes 55339147
chr17 63013227 63013238 HOXA10 JASPAR yes 55339148
chr17 63013227 63013238 HOXC11 JASPAR yes 55339149
chr17 63013227 63013238 HOXC12 JASPAR yes 55339150
chr17 63013227 63013238 HOXD12 JASPAR yes 55339151
chr17 63013228 63013238 GSX2 JASPAR yes 55339152
chr17 63013228 63013238 HOXB3 JASPAR yes 55339153
chr17 63013228 63013238 MEOX2 JASPAR yes 55339154
chr17 63013228 63013238 MNX1 JASPAR yes 55339155
chr17 63013229 63013237 NKX6-1 JASPAR yes 55339156
Genes associated with rs560259020[chr17:63013236], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More