EnhancerDB
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  3. rs560263890[chr11:19972660]
Enhancers that have rs560263890[chr11:19972660]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 19970665 19987395 enh13835
Astrocyte Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs560263890[chr11:19972660]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 19971910 19976711 ZNF274 GTRD no Bone Marrow (K562) 107961388
chr11 19972001 19973987 ZNF274 GTRD no Bone Marrow (K562) 107961389
chr11 19972320 19974903 ZNF274 GTRD no Bone Marrow (K562) 107961390
chr11 19972651 19972661 HOXC10 JASPAR yes 37818170
chr11 19972651 19972661 HOXD11 JASPAR yes 37818171
chr11 19972651 19972661 HOXD13 JASPAR yes 37818172
chr11 19972651 19972662 HOXA10 JASPAR yes 37818173
chr11 19972651 19972662 HOXC11 JASPAR yes 37818174
chr11 19972651 19972662 HOXC12 JASPAR yes 37818175
chr11 19972651 19972662 HOXD12 JASPAR yes 37818176
chr11 19972652 19972661 CDX1 JASPAR yes 37818177
chr11 19972652 19972663 CDX2 JASPAR yes 37818178
Genes associated with rs560263890[chr11:19972660], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More