EnhancerDB
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  3. rs560277425[chr1:172907803]
Enhancers that have rs560277425[chr1:172907803]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172893305 172912815 enh12378
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Prostate (RWPE1) Brain (SK-N-MC) Esophagus Astrocyte Brain (SK-N-SH) Stomach Muscle (A673) Placenta Muscle (Myoblast) Spleen Uterus Heart
Transcript factors that have rs560277425[chr1:172907803]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172906439 172908556 ZNF274 GTRD no Bone Marrow (K562) 21350681
chr1 172906588 172908052 ZNF274 GTRD no Bone Marrow (K562) 21350683
chr1 172906786 172907832 ZBTB33 GTRD no Brain (SK-N-SH) 21350690
chr1 172907791 172907803 PKNOX1 JASPAR yes 33168843
chr1 172907791 172907803 TGIF1 JASPAR yes 33168844
chr1 172907791 172907803 TGIF2 JASPAR yes 33168845
chr1 172907794 172907804 TBX21 JASPAR yes 33168846
chr1 172907794 172907805 TBX2 JASPAR yes 33168847
chr1 172907794 172907807 EOMES JASPAR yes 33168848
chr1 172907795 172907803 TBX15 JASPAR yes 33168849
chr1 172907795 172907803 TBX1 JASPAR yes 33168850
chr1 172907795 172907803 TBX4 JASPAR yes 33168851
chr1 172907795 172907803 TBX5 JASPAR yes 33168852
chr1 172907801 172907805 YY1 TRANSFAC yes 33168853
Genes associated with rs560277425[chr1:172907803], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More