EnhancerDB
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  3. rs56030285[chr1:204255831]
Enhancers that have rs56030285[chr1:204255831]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 204245511 204275535 enh12577
Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs56030285[chr1:204255831]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 204253317 204256076 ZNF143 GTRD no Epithelial (MCF-7) 21370352
chr1 204253317 204256076 ZNF143 GTRD no Epithelial (MCF-7) 107859792
chr1 204253317 204256076 ZNF143 GTRD no Epithelial (MCF-7) 107859793
chr1 204255780 204256309 ZNF143 GTRD no Epithelial (MCF-7) 21370359
chr1 204255780 204256309 ZNF143 GTRD no Epithelial (MCF-7) 107859800
chr1 204255819 204255833 PLAG1 JASPAR yes 34688394
chr1 204255820 204255834 PLAG1 JASPAR yes 34688395
chr1 204255824 204255841 RXRA JASPAR yes 34688396
Genes associated with rs56030285[chr1:204255831], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More