EnhancerDB
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  3. rs560308708[chr12:113679183]
Enhancers that have rs560308708[chr12:113679183]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 113663085 113691755 enh2610
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs560308708[chr12:113679183]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 113679170 113679191 REST JASPAR yes 123819273
chr12 113679178 113679188 FIGLA JASPAR yes 123819274
chr12 113679178 113679188 ID4 JASPAR yes 123819275
chr12 113679178 113679188 TCF3 JASPAR yes 123819276
chr12 113679178 113679188 TCF4 JASPAR yes 123819277
chr12 113679179 113679194 RFX5 JASPAR yes 123819278
Genes associated with rs560308708[chr12:113679183], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More