EnhancerDB
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  3. rs560339777[chr16:85549609]
Enhancers that have rs560339777[chr16:85549609]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85541745 85623813 enh16872
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs560339777[chr16:85549609]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85548979 85552235 ZNF274 GTRD no Bone Marrow (K562) 21726853
chr16 85548994 85552184 ZNF274 GTRD no Bone Marrow (K562) 21726854
chr16 85549156 85551670 ZNF274 GTRD no Bone Marrow (K562) 21726856
chr16 85549186 85551685 ZNF143 GTRD no Epithelial (MCF-7) 21726857
chr16 85549192 85551732 ZNF143 GTRD no Epithelial (MCF-7) 21726858
chr16 85549192 85552186 ZNF143 GTRD no Epithelial (MCF-7) 21726859
chr16 85549224 85551006 ZNF274 GTRD no Bone Marrow (K562) 21726860
chr16 85549238 85551380 ZNF274 GTRD no Bone Marrow (K562) 21726861
chr16 85549356 85549957 ZNF274 GTRD no Bone Marrow (K562) 21726862
chr16 85549357 85549718 ZNF274 GTRD no Bone Marrow (K562) 21726863
chr16 85549362 85552152 ZNF274 GTRD no Liver (HepG2) 21726864
chr16 85549379 85549681 ZNF274 GTRD no Bone Marrow (K562) 21726865
chr16 85549393 85549735 ZNF274 GTRD no Bone Marrow (K562) 21726866
chr16 85549428 85550044 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21726867
chr16 85549451 85550054 ZBTB33 GTRD no Lung (A549) 21726868
chr16 85549524 85549980 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21726869
chr16 85549529 85549873 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21726870
chr16 85549543 85549963 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21726871
chr16 85549548 85550092 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21726872
chr16 85549570 85550066 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21726873
chr16 85549581 85549941 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21726874
chr16 85549591 85549612 ZNF263 JASPAR yes 12070775
chr16 85549594 85549910 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21726875
chr16 85549599 85552068 ZNF274 GTRD no Bone Marrow (K562) 21726876
chr16 85549602 85549892 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21726877
chr16 85549604 85549940 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21726878
chr16 85549607 85549613 PEA3 TRANSFAC yes 12070777
Genes associated with rs560339777[chr16:85549609], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More