EnhancerDB
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  3. rs560347626[chr1:206858998]
Enhancers that have rs560347626[chr1:206858998]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 206857225 206902007 enh27440
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs560347626[chr1:206858998]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 206857972 206860085 POLR2A UCSC Txn Factor no Conserved 107863177
chr1 206857972 206860085 POLR2A UCSC Txn Factor no Conserved 107863178
chr1 206858529 206859153 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21372388
chr1 206858529 206859153 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107863179
chr1 206858834 206859458 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21372389
chr1 206858834 206859458 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107863180
chr1 206858838 206859274 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21372390
chr1 206858838 206859274 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107863181
chr1 206858841 206859231 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21372391
chr1 206858841 206859231 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107863182
chr1 206858854 206859344 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107863183
chr1 206858860 206859176 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21372392
chr1 206858860 206859176 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107863184
chr1 206858864 206859328 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21372393
chr1 206858864 206859328 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 107863185
chr1 206858877 206859257 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21372394
chr1 206858877 206859257 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107863186
chr1 206858901 206859467 ZNF274 GTRD no Bone Marrow (K562) 21372395
chr1 206858901 206859467 ZNF274 GTRD no Bone Marrow (K562) 107863187
chr1 206858914 206859459 ZNF274 GTRD no Liver (HepG2) 21372396
chr1 206858914 206859459 ZNF274 GTRD no Liver (HepG2) 107863188
chr1 206858915 206859285 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21372397
chr1 206858915 206859285 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107863189
chr1 206858920 206859424 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21372398
chr1 206858920 206859424 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107863190
chr1 206858934 206859454 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107863191
chr1 206858939 206859315 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21372399
chr1 206858939 206859315 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107863192
chr1 206858941 206859217 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21372400
chr1 206858941 206859217 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107863193
chr1 206858954 206859676 ZNF274 GTRD no Cervix (HeLa-S3) 21372401
chr1 206858954 206859676 ZNF274 GTRD no Cervix (HeLa-S3) 107863194
chr1 206858966 206859434 ZNF143 GTRD no Epithelial (MCF-7) 21372402
chr1 206858966 206859434 ZNF143 GTRD no Epithelial (MCF-7) 107863195
chr1 206858980 206859516 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21372403
chr1 206858980 206859516 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107863196
Genes associated with rs560347626[chr1:206858998], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More