EnhancerDB
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  3. rs560370609[chr1:21588602]
Enhancers that have rs560370609[chr1:21588602]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 21585105 21605175 enh26575
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Liver (HepG2) Prostate (RWPE1) Heart
chr1 21588176 21588724 vista662
VISTA
Transcript factors that have rs560370609[chr1:21588602]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 21586237 21589119 TCF7L2 GTRD no Colon (HCT116) 21325274
chr1 21586237 21589119 TCF7L2 GTRD no Colon (HCT116) 107802345
chr1 21586237 21589119 TCF7L2 GTRD no Colon (HCT116) 107802346
chr1 21588584 21588604 ESR1 JASPAR yes 27288189
chr1 21588584 21588604 ESR1 JASPAR yes 118245474
chr1 21588587 21588605 ESR2 JASPAR yes 27288190
chr1 21588587 21588605 ESR2 JASPAR yes 118245475
chr1 21588588 21588605 ESR1 JASPAR yes 27288191
chr1 21588588 21588605 ESR1 JASPAR yes 118245476
chr1 21588589 21588604 ESR2 JASPAR yes 27288192
chr1 21588589 21588604 ESR2 JASPAR yes 118245477
chr1 21588589 21588609 ESR1 JASPAR yes 27288193
chr1 21588589 21588609 ESR1 JASPAR yes 118245478
chr1 21588591 21588602 NRL JASPAR yes 27288194
chr1 21588591 21588602 NRL JASPAR yes 118245479
chr1 21588598 21588606 CREB1 JASPAR yes 27288195
chr1 21588598 21588606 CREB1 JASPAR yes 118245480
Genes associated with rs560370609[chr1:21588602], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More