EnhancerDB
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  3. rs560376977[chr1:203483023]
Enhancers that have rs560376977[chr1:203483023]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 203471885 203497995 enh12556
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs560376977[chr1:203483023]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 203482554 203483204 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21369117
chr1 203482754 203483404 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21369118
chr1 203482802 203484325 ZNF143 GTRD no Epithelial (MCF-7) 21369119
chr1 203482808 203484275 ZNF143 GTRD no Epithelial (MCF-7) 21369120
chr1 203482960 203483492 TCF7L2 GTRD no Colon (HCT116) 21369121
chr1 203483019 203483033 GLIS3 JASPAR yes 34634039
Genes associated with rs560376977[chr1:203483023], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More