EnhancerDB
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  3. rs560397452[chr1:21351293]
Enhancers that have rs560397452[chr1:21351293]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 21337448 21356675 enh106
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs560397452[chr1:21351293]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 21351280 21351295 HNF4A JASPAR yes 27268438
chr1 21351281 21351296 HNF4G JASPAR yes 27268439
chr1 21351293 21351307 GATA2 JASPAR yes 27268442
chr1 21351293 21351308 FOXP1 JASPAR yes 27268443
Genes associated with rs560397452[chr1:21351293], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More