EnhancerDB
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  3. rs560404[chr1:55041991]
Enhancers that have rs560404[chr1:55041991]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 55021705 55049987 enh11873
Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs560404[chr1:55041991]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 55041980 55041994 NR2F1 JASPAR yes 28994591
chr1 55041985 55041998 NR2F1 JASPAR yes 28994592
chr1 55041986 55041994 CREB1 JASPAR yes 28994593
chr1 55041989 55041993 ESR1 TRANSFAC yes 28994594
Genes associated with rs560404[chr1:55041991], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More