EnhancerDB
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  3. rs560416023[chr12:113675174]
Enhancers that have rs560416023[chr12:113675174]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 113663085 113691755 enh2610
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs560416023[chr12:113675174]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 113675155 113675176 IRF1 JASPAR yes 123818709
chr12 113675158 113675179 IRF1 JASPAR yes 123818711
chr12 113675161 113675176 FOXP1 JASPAR yes 123818712
chr12 113675163 113675178 FOXP1 JASPAR yes 123818713
chr12 113675164 113675179 FOXP1 JASPAR yes 123818714
chr12 113675165 113675180 FOXP1 JASPAR yes 123818715
chr12 113675166 113675181 FOXP1 JASPAR yes 123818716
chr12 113675167 113675182 FOXP1 JASPAR yes 123818717
Genes associated with rs560416023[chr12:113675174], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More