EnhancerDB
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  3. rs560416505[chr1:21667534]
Enhancers that have rs560416505[chr1:21667534]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 21624465 21668955 enh110
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs560416505[chr1:21667534]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 21666478 21670763 ZNF274 GTRD no Liver (HepG2) 107802358
chr1 21667518 21667539 ZNF263 JASPAR yes 27298707
chr1 21667520 21667540 RREB1 JASPAR yes 27298708
chr1 21667524 21667544 RREB1 JASPAR yes 27298709
chr1 21667528 21667537 SP1 TRANSFAC yes 27298710
chr1 21667529 21667535 SP1 TRANSFAC yes 27298711
chr1 21667529 21667539 SP1 JASPAR yes 27298712
chr1 21667530 21667537 SP1 TRANSFAC yes 27298713
chr1 21667531 21667536 SP1 TRANSFAC yes 27298714
chr1 21667531 21667537 SP1 TRANSFAC yes 27298715
chr1 21667531 21667538 SP1 TRANSFAC yes 27298716
chr1 21667533 21667543 ZNF740 JASPAR yes 27298717
Genes associated with rs560416505[chr1:21667534], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More