EnhancerDB
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  3. rs56041710[chr17:71286689]
Enhancers that have rs56041710[chr17:71286689]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 71282705 71302156 enh17360
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs56041710[chr17:71286689]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 71286540 71287018 SOX2 GTRD no Neural Stem Cells (H9) 108290922
chr17 71286562 71286988 SOX2 GTRD no Neural Stem Cells (H9) 108290923
chr17 71286683 71286689 ZNF354C JASPAR yes 55858598
chr17 71286688 71286703 RFX5 JASPAR yes 55858599
chr17 71286689 71286709 RREB1 JASPAR yes 55858600
Genes associated with rs56041710[chr17:71286689], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More