EnhancerDB
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  3. rs560424427[chr1:212460471]
Enhancers that have rs560424427[chr1:212460471]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 212456045 212470579 enh910
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Lung (PC-9) Esophagus Bone (Osteoblast) Lung Blood (OCI-LY7) Blood (GM12878) Colon (HCT116) Uterus Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Neural Stem Cells (H9) Stomach
Transcript factors that have rs560424427[chr1:212460471]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 212460462 212460477 HNF4A JASPAR yes 35117930
chr1 212460466 212460476 NFIA JASPAR yes 35117931
chr1 212460467 212460476 NFIX JASPAR yes 35117932
chr1 212460468 212460474 NFIC JASPAR yes 35117933
Genes associated with rs560424427[chr1:212460471], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More