EnhancerDB
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  3. rs560460563[chr3:56952620]
Enhancers that have rs560460563[chr3:56952620]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 56948005 56967995 enh7237
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Lung Heart
Transcript factors that have rs560460563[chr3:56952620]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 56952607 56952621 SPI1 JASPAR yes 2611069
chr3 56952607 56952621 SPIC JASPAR yes 2611070
chr3 56952609 56952630 IRF1 JASPAR yes 2611071
chr3 56952611 56952622 FLI1 JASPAR yes 2611072
Genes associated with rs560460563[chr3:56952620], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More