EnhancerDB
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  3. rs560506282[chr16:85583965]
Enhancers that have rs560506282[chr16:85583965]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85541745 85623813 enh16872
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs560506282[chr16:85583965]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85581547 85584240 TCF7L2 GTRD no Colon (HCT116) 21728643
chr16 85581994 85583977 ZNF274 GTRD no Bone Marrow (K562) 21728648
chr16 85582917 85583977 ZNF143 GTRD no Epithelial (MCF-7) 21728655
chr16 85583517 85584024 SOX2 GTRD no Neural Stem Cells (H9) 21728666
chr16 85583603 85584179 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21728667
chr16 85583669 85584109 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21728668
chr16 85583732 85584401 TCF7L2 GTRD no Colon (HCT116) 21728669
chr16 85583742 85584092 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21728670
chr16 85583765 85584055 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21728671
chr16 85583945 85583965 ESR1 JASPAR yes 12075303
chr16 85583948 85583968 PPARG JASPAR yes 12075304
chr16 85583961 85583971 TFCP2 JASPAR yes 12075309
Genes associated with rs560506282[chr16:85583965], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More